BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039A10LP1|AL430644
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig939 703 0.0
3x_Contig321 494 e-139
>3x_Contig939
Length = 3877
Score = 703 bits (354), Expect = 0.0
Identities = 363/366 (99%)
Strand = Plus / Plus
Query: 1 acagatctgtttcacagatccattccccaattccacttgagaaacgtacattttctccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3512 acagatctgtttcacagatccattccccaattccacttgagaaacgtacattttctccga 3571
Query: 61 attgggatgcaatgctacttgttggaatttcccaaccttcaagttcaatagctcgaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3572 attgggatgcaatgctacttgttggaatttcccaaccttcaagttcaatagctcgaaagg 3631
Query: 121 aaaccgttttgcctcattgcaaatcctgctaacatggaaatcccgtaccaatcgcttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3632 aaaccgttttgcctcattgcaaatcctgctaacatggaaatcccgtaccaatcgcttcac 3691
Query: 181 aactccttgtagaaacattatatcccttttgagttgttatcactggaatggatcaaccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3692 aactccttgtagaaacattatatcccttttgagttgttatcactggaatggatcaaccaa 3751
Query: 241 gtagcagatccataaaagaataccgagttatttactgctgacagaaatcatgggtaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3752 gtagcagatccataaaagaataccgagttatttactgctgacagaaatcatgggtaagat 3811
Query: 301 ttttatcatctctcagacttctaccgtatcgagttgcgagatccgagtttggcagagatg 360
|||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 3812 ttttatcatctctcagacttctaccgtatcgagttgcgagatcctatttttgcagagatg 3871
Query: 361 agctaa 366
||||||
Sbjct: 3872 agctaa 3877
>3x_Contig321
Length = 1151
Score = 494 bits (249), Expect = e-139
Identities = 262/265 (98%), Gaps = 1/265 (0%)
Strand = Plus / Minus
Query: 698 cgtgcattctgatattactcccttgttcactgatcggtataaggacgagtattcaatttt 757
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1151 cgtgcattcttatattactccctttttcactgatcggtataaggacgagtattcaatttt 1092
Query: 758 atcttgaatataacaaggaaaatagtgacaggcaccagtatatcaagctgatctcatagt 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 atcttgaatataacaaggaaaatagtgacaggcaccagtatatcaagctgatctcatagt 1032
Query: 818 tgatttagttcgctataagtttgcattctgaaatataccagtaacacgcgttaaaagcat 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 tgatttagttcgctataagtttgcattctgaaatataccagtaacacgcgttaaaagcat 972
Query: 878 acataatcgaagaaatactctttttgacggcgatttacacctcaaagaatttctactgga 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 acataatcgaagaaatactctttttgacggcgatttacacctcaaagaatttctactgga 912
Query: 938 aagtatcagggta-ctaattcacat 961
||||||||||||| |||||||||||
Sbjct: 911 aagtatcagggtacctaattcacat 887
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9037
Number of Sequences: 1807
Number of extensions: 9037
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 2
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)